June 23, 2015 Liz Amdahl

Amyloid Plaque Counting

Product Overview

Indica Labs’ object colocalization algorithms can be used for fully automated amyloid plaque counting. In the example above, the image analysis software has been configured to count amyloid plaques in brain tissue (red). The software identifies individual plaques and reports total plaque count, total plaque area, and average plaque area. The algorithm includes special logic for excluding false positives such as stained artifacts along the tissue section edges. These capabilities allow for fully automated analysis of large batches of brain images.

In addition to accumulating total plaque areas and average plaque sizes, this tool can generate a detailed spreadsheet containing statistics for each individual plaque.

The object counting tool integrates seamlessly into the   HALO™ platform which is compatible with a number of third party systems and   file formats.


Contact info@indicalab.com for product demonstration and pricing information or  upload some images for a free trial.

Supported File Formats:


  • – Non Proprietary (JPG, TIF)
  • – 3D Histech (MRXS)
  • – Aperio (SVS, AFI, eSlideManager)
  • – Hamamatsu (NDPI, NDPIS)
  • – Leica (SVS, SCN, LIF)
  • – Mikroscan (TIF)
  • – Nikon (ND2)
  • – Olympus (VSI)
  • – Perkin Elmer (QPTIFF, Vectra TIF)
  • – Philips IMS
  • – Zeiss (CZI)

Don’t see the format you’re looking for? Contact us to make a request

CLOSE
Thank you for signing-up. Please check your email for link to access webinar recording.