July 7, 2015 Liz Amdahl

Fluorescent Membrane Quantification

Product Overview

The Indica Labs Membrane FL Quantification tool measures fluorescently-labeled membranous markers on a cell-by-cell basis. The tool is color configurable and can be used to quantify any imagable fluorescent dye.

In the example above, the software measures HER2 expression in breast tissue. Each cell nucleus and cell membrane is identified and matched. Cells are then classified as negative, weak, moderate, or strong positive and cell membranes are color coded yellow, orange, and red. The software reports overall scores and positivity percentages for the entire analysis region (including H-Score). It can also report individual expression profiles for each cell.

The Membrane FL tool integrates seamlessly into the   HALO™ platform which is compatible with a number of third party systems and   file formats.

Contact info@indicalab.com for product demonstration and pricing information or upload some images for a free trial.

Supported File Formats:


  • – Non Proprietary (JPG, TIF)
  • – 3D Histech (MRXS)
  • – Aperio (SVS, AFI, eSlideManager)
  • – Hamamatsu (NDPI, NDPIS)
  • – Leica (SVS, SCN, LIF)
  • – Mikroscan (TIF)
  • – Nikon (ND2)
  • – Olympus (VSI)
  • – Perkin Elmer (QPTIFF, Vectra TIF)
  • – Philips IMS
  • – Zeiss (CZI)

Don’t see the format you’re looking for? Contact us to make a request

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